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Spatial variation of phytoplankton and some physico-chemical variables during the highest flood season in Lake Nasser (Egypt) OceanDocs
Abdel-Halim, A.M.; Gharib, S.M..
Species composition, abundance, and phytoplankton biomass in Lake Nasser were studied during the highest flood season in autumn 1999, and were supported by some physico-chemical environmental parameters. The nutrient salts levels were low to medium, with ranges of 0.96-9.92 g/L for nitrite, 20.14-72.14 g/L for ammonia, complete depletion -27.69 g/L for phosphate, and 5.83-9.00 g/L for silicate. A total of 71 taxa were identified, of which 46% were chlorophytes, 26% bacillariophytes and 22% cyanophytes. Phytoplankton abundance and biomass values were higher in the northern stations than in the southern, but were lower than previously reported, indicating approaching from oligomesotrophic status, with,respectively, means of 108.9 x 104 unit/L and 1.18...
Tipo: Journal Contribution Palavras-chave: Environmental Studies; Phytoplankton; Phytoplankton; Http://aims.fao.org/aos/agrovoc/c_13344.
Ano: 2006 URL: http://hdl.handle.net/1834/1454
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The paralytic shellfish toxin, saxitoxin, enters the cytoplasm and induces apoptosis of oyster immune cells through a caspase-dependent pathway ArchiMer
Abikhalil, Celina; Finkelstein, Darren S.; Conejero, Genevieve; Du Bois, Justin; Destoumieux-garzon, Delphine; Rolland, Jean-luc.
Exposure of the toxin-producing dinoflagellate Alexandrium catenella (A. catenella) was previously demonstrated to cause apoptosis of hemocytes in the oyster species Crassostrea gigas. In this work, a coumarin-labeled saxitoxin appeared to spread throughout the cytoplasm of the hemocytes. PSTs, including saxitoxin, were also shown to be directly responsible for inducing apoptosis in hemocytes, a process dependent on caspase activation and independent of reactive oxygen species (ROS) production. A series of in vitro labeling and microscopy experiments revealed that STX and analogs there of induced nuclear condensation, phosphatidylserine exposure, membrane permeability, and DNA fragmentation of hemocytes. Unlike in vertebrates, gonyautoxin-5 (GTX5), which...
Tipo: Text Palavras-chave: Shellfish; Toxin; Harmful algae; Phytoplankton.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00391/50272/50905.pdf
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Spatial-temporal variability of phytoplankton abundance and species composition in Lake Victoria, Kenya: implication for water quality management OceanDocs
Abuodha, J.; Mwirigi, P.; Gikuma-Njuru, P.; Okungu, J.; Hecky, R.E..
Study of phytoplankton abundance and species composition in Lake Victoria, Kenya showed a marked difference between the main lake and the semi-closed Nyanza (Winam) Gulf. Phytoplankton biomass and species composition showed both spatial and seasonal variation. In the main lake the highest chlorophyll concentration was during the short stratification season (August to September) but in the gulf it was after the short and long rainy seasons. Deep mixing depth (aprox. 30 m) in the main lake imposes light limitation to algal growth leading to the observed lower chlorophyll in the main lake, despite the higher soluble reactive phosphorus (SRP) in the main lake compared to the gulf. Blue green algae were the most abundant algal species, contributing between 45...
Tipo: Proceedings Paper Palavras-chave: Phytoplankton; Water quality; Geographical distribution; Phytoplankton; Water quality; Http://aims.fao.org/aos/agrovoc/c_13344; Http://aims.fao.org/aos/agrovoc/c_16061.
Ano: 2006 URL: http://hdl.handle.net/1834/1471
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Phytoplankton chlorophyll a distribution and water column stability in the central Atlantic Ocean ArchiMer
Agusti, S; Duarte, Cm.
The relationship between the vertical distribution of phytoplankton chlorophyll a and the physical structure of the upper central Atlantic Ocean was investigated based on results from a cruise across the tropical Atlantic (27 degrees N to 36 degrees S). The thermocline was very sharp and shallow in the northern part of the transect, off the coast of Mauritania and Senegal, and deepened progressively to reach > 150 m deep between 20 degrees S and 30 degrees S. There was a deep chl a maximum associated with the thermocline throughout the transect, reaching chl a concentrations up to 50 fold greater than those in surface waters. The chl a concentration was greatest off the NW African coast and declined towards the south, parallel to a progressive deepening...
Tipo: Text Palavras-chave: Chlorophylle; Phytoplancton; Stabilité verticale; Océan Atlantique central; Chlorophyll; Phytoplankton; Water column stability; Central Atlantic Ocean.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/00325/43620/43311.pdf
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First report of the potentially toxic marine diatom Pseudo-nitzschia simulans (Bacillariophyceae) from the East Australian Current ArchiMer
Ajani, Penelope A.; Lim, Hong Chang; Verma, Arjun; Lassudrie, Malwenn; Mcbean, Katie; Doblin, Martina A.; Murray, Shauna A..
Certain species of the marine diatom genus Pseudo‐nitzschia are responsible for the production of the domoic acid (DA), a neurotoxin that can bioaccumulate in the food chain and cause amnesic shellfish poisoning (ASP) in animals and humans. This study extends our knowledge by reporting on the first observation of the potentially toxic species Pseudo‐nitzschia simulans from this region. One clonal strain of P. simulans was isolated from the East Australian Current and characterized using light and transmission electron microscopy, and phylogenetic analyses based on regions of the internal transcribed spacer (ITS) and the D1–D3 region of the large subunit (LSU) of the nuclear‐encoded ribosomal deoxyribonucleic acid (rDNA), as well as examined for DA...
Tipo: Text Palavras-chave: Domoic acid; East Australian current; Harmful algal blooms; Phytoplankton; Shellfish.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00618/73047/75313.pdf
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Comet assay in phytoplankton as biomarker of genotoxic effects of environmental pollution ArchiMer
Akcha, Farida; Arzul, Genevieve; Rousseau, Sabrina; Bardouil, Michele.
The alkaline comet assay was tested on different microalgae: the clinofiagellates, Karenia mikimotoi and Alexandrium minuturn, and the diatom, Chaetoceros gracilis. The microalgae were exposed during their exponential growth to the model direct genotoxicant, hydrogen peroxide (1 h, 5 and 100 pM H2O2). Following H2O2 exposure, the comet assay was validated only for K. mikimotoi for which genotoxicity was observed from the lowest tested concentration of 5 pM with a concentration-dependent effect. C. gracilis was too small in size (4 mu m) to be correctly analysed. For A. minuturn, our lysis buffer was not strong enough to digest the cellulosic thecal plates. For K. mikimotoi, the comet assay was thus applied for the study of the genotoxic effects of...
Tipo: Text Palavras-chave: Comet assay; Genotoxicity; Pesticides; Phytoplankton.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/publication-4504.pdf
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Estudios ecológicos en el Golfo San Jorge y adyacencias (Atlántico sudoccidental). Distribución, abundancia y variación estacional del fitoplancton en relación a factores físico-químicos y la dinámica hidrológica. OceanDocs
Akselman, R..
This study was based on four seasonal cruises during 1984 and 1985. It revealed a thermo-haline frontal system formed by the advection of the Coastal Water mass flowing in two branches, one running towards the coast and the other mid-shelf directed. The thermocline developed between late spring and autumn results in a low inorganic nutrient concentration in the upper layer. Nonetheless in winter, a vertical homogeneity and high nutrient concentration were observed. Phytoplankton development presented a typical temperate-seas annual cycle. In winter, reduced populations were dominated by diatoms. The highest biomass concentration in the cycle coincided with the spring blooming, to which Thalassio sira anguste-lineata,Alexandrium tamarense, Heterocapsa...
Tipo: Theses and Dissertations Palavras-chave: Phytoplankton; Abundance; Trophic relationships; Cysts; Seasonal variations; Seasonal thermocline; Plankton surveys; Environmental effects; Phytoplankton; Cysts; Http://aims.fao.org/aos/agrovoc/c_13344; Http://aims.fao.org/aos/agrovoc/c_34811.
Ano: 1996 URL: http://hdl.handle.net/1834/1464
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Distribución del plancton a mesoescala en un área de reproducción de la anchoíta en la plataforma bonaerense OceanDocs
Akselman, R.; Carreto, J.I.; Ramirez, F.C..
In order to determine the distribution patterns of phytoplanktonic and zooplanktonic species that constitute the main food of the argentine anchovy (Engraulis anchoita), a study was made within a coastal spawning area on meso-scaled space (approximately 7 miles between stations). It was observed the predominacne of the copepod Oithona helgolandica and copepodites stages of other small-sized species, thus inferring the preponderance of nauplii stages which constitute the main food of early anchovy larvae. A high spatial heterogeneity was found in the distrtibution of both phytoplanktonic and zooplanktonic communities. Phytoplankton showed a patchiness distribution both in horizontal and vertical directions. Diatoms, dinoflagellates and coccolithophoirids...
Tipo: Journal Contribution Palavras-chave: Phytoplankton; Zooplankton; Trophic relationships; Population density; Horizontal distribution; Species diversity; Phytoplankton; Zooplankton; Species diversity; Population density; Http://aims.fao.org/aos/agrovoc/c_13344; Http://aims.fao.org/aos/agrovoc/c_15490; Http://aims.fao.org/aos/agrovoc/c_33954; Http://aims.fao.org/aos/agrovoc/c_6112.
Ano: 1986 URL: http://hdl.handle.net/1834/2034
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Utilisation conjointe de FlowCAM / ZooPhytoImage et de la cytométrie en flux. Premiers résultats et perspectives. Action 9. FlowCam ZooPhytoImage. Livrable n° 4. Rapport final, 23 septembre 2014 ArchiMer
Ali, Nour; Wacquet, Guillaume; Didry, Morgane; Hamad, Denis; Artigas, Luis Felipe; Grosjean, Philippe.
The goal of this study is to investigate about the possibility of coupling measurements made by image analysis from the FlowCAM with Zoo/PhytoImage with data obtained with a flux cytometer (pulse-shape-recording Scanning Flow Cytometry) on the same samples gathered in current monitoring networks in the eastern Channel and southern North Sea. In this preliminary study, we collected a series of samples off Boulogne-sur-Mer (SRN-REPHY monitoring system run by IFREMER) and along a transect in the Baie St-Jean (Wimereux-Slack) run by LOG. All these samples were digitized with a FlowCAM and measured with a scanning flow cytometer (CytoSense). The complete analysis with the FlowCAM and Zoo/PhytoImage is detailed in the present report. In order to get a better...
Tipo: Text Palavras-chave: Manche – Mer du Nord; Phytoplancton; Analyse d'image; Classification supervisée; Cytométrie en flux; Eastern English Channel and southern North Sea; Phytoplankton; Image analysis; Machine learning; Scanning Flow Cytometry.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00363/47442/47470.pdf
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Plankton diversity and limnological characterization in two shallow tropical urban reservoirs of Pernambuco State, Brazil Anais da ABC (AABC)
Almeida,Viviane L.S.; Melão,Maria da Graça G.; Moura,Ariadne N..
Plankton diversity, physical and chemical variables and chlorophyll a were analyzed in two shallow urban reservoirs with different trophic degrees on Pernambuco State, northeastern Brazil. High eutrophication levels were observed in Apipucos reservoir, while Prata reservoir was considered oligotrophic. Values reported for physical and chemical variables and chlorophyll a differed among the studied ecosystems. Richness and plankton diversity were higher in Apipucos reservoir especially for phytoplankton. The presence of potential toxic Cyanophyceae in both reservoirs reflects a problem mainly to Prata reservoir, which is used for public water supply. Differences were observed for some variables among sites of study in Apipucos reservoir, while the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Northeastern Brazil; Phytoplankton; Trophic status; Zooplankton.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652012000200022
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A single bio-energetics growth and reproduction model for the oyster Crassostrea gigas in six Atlantic ecosystems ArchiMer
Alunno-bruscia, Marianne; Bourles, Yves; Maurer, Daniele; Robert, Stephane; Mazurie, Joseph; Gangnery, Aline; Goulletquer, Philippe; Pouvreau, Stephane.
Many studies based on bioenergetics growth models have investigated the effects of environmental factors on oyster (Crassostrea gigas) growth and physiology. However, most of these models are site-specific and cannot be applied to other culture sites without the re-estimation of parameters or re-formulation of some processes. We aimed to develop a generic growth model suitable for application in contrasting environments, with a constant set of parameters. We tested the oyster-DEB model (Bourlès et al. 2009) for the stimulation of C. gigas growth in different cohorts (spats and adults) at major shellfish culture sites in France, in several years: Arcachon (1993–1994); Marennes-Oléron (2007); Quiberon (1999, 2000, 2001); Rade de Brest (2008); Baie du...
Tipo: Text Palavras-chave: DEB theory; Modelling; Bivalves; Crassostrea gigas; Phytoplankton; Temperature effect; Coastal environment..
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00043/15403/12762.pdf
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Phytoplankton composition and functional groups in a tropical humic coastal lagoon, Brazil Acta Botanica
Alves-de-Souza,Catharina; Menezes,Mariângela; Huszar,Vera.
This paper presents the composition and functional groups of the phytoplankton from Comprida lagoon, a tropical humic coastal Lagoon located in Southeast Brazil. A total of 28 taxa was found, distributed in eight taxonomic divisions as follows: 26% Heterokontophyta, 21% Chlorophyta, 21% Cyanophyta, 14% Bacillariophyta, 14% Cryptophyta, and 4% Prymnesiophyta. Twenty-three taxa were identified at the specific and infraspecific levels, from which four are new records for Brazil and two for Rio de Janeiro State. Phytoplankton of the Comprida lagoon was comprised of several flagellates, but also eukaryote and prokaryote picoplankton, filamentous cyanobacteria and several diatoms. The biomass was lower than that found in other lacustrine systems, and showed...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Phytoplankton; Tropics; Humic systems; Coastal lagoons; Functional groups; Southeast Brazil.
Ano: 2006 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062006000300019
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Choix de products pour lutter contre la pollution du milieu marin par les hydrocarbures. III. Toxicite relative de produits a antipetrole sur deux organisme marins. ArchiMer
Alzieu, Claude.
The necessity to combat oil slicks makes it necessary to assess the relative effectiveness and toxicity of dispersal agents used. This is usually done by using individual or groups of indicator organisms. The theory behind the various approaches is outlined, and some considerations are listed for the choice of technique. 2 organisms were chosen - the Portuguese oyster (Crassostrea), and the phytoplankton alga Phaeodactylum tricornutum Bohlin, on which if feeds - and the oyster closing reaction, and level of inhibition of growth under the influence of irritant products was measured. Methods are described, and the results shown for emulsifying, agglomerating and precipitating products. The results are discussed, and the mode of interference of the products...
Tipo: Text Palavras-chave: Choice of technique; Phytoplankton; Organisms; Toxicity; Oil spills; Pollution.
Ano: 1972 URL: http://archimer.ifremer.fr/doc/1972/publication-2073.pdf
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Les elements nutritifs en baie de Seine ArchiMer
Aminot, Alain; Kerouel, Roger; Mauvais, J.
Seasonal variations of dissolved nutrient concentrations are reported in this paper. Impacts of freshwater are investigated by the study of dilution, nutrient quantity, and relation with phytoplanktonic growth.
Tipo: Text Palavras-chave: Silicon; Phosphorus; Nitrogen; Seasonal variations; Dilution; Primary production; Eutrophic waters; Phytoplankton; River discharge; Coastal zone; Nutrients (mineral).
Ano: 1985 URL: http://archimer.ifremer.fr/doc/1985/acte-1295.pdf
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Phytoplancton des zones myticoles de la baie de Vilaine et intoxication par les coquillages. ArchiMer
Andresen Leitao, Maria Da Paz; Lassus, Patrick; Maggi, Pierre; Le Baut, Claire; Chauvin, Jacky; Truouet, Philippe.
Following 1978 and 1981 human poisoning by mussels in Vilaine Bay (France) a survey of potentially toxic dinoflagellates was conducted in that area in 1982. At the same time paralytic shellfish poison (PSP) analyses were made, the authors studied the dinoflagellates encountered in the intestinal guts of mussels from January to August 1982. Results failed to demonstrate an occurrence of PSP producing species, either by toxicological analysis or dinoflagellate persistency in the mussel guts.
Tipo: Text Palavras-chave: Mytilus edulis; Bivalvia; Marine mollusks; Stomach content; Toxicity; Phytoplankton; Biological poisons; Mussel culture.
Ano: 1982 URL: http://archimer.ifremer.fr/doc/1982/publication-1853.pdf
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Revealing the Organization of Complex Adaptive Systems through Multivariate Time Series Modeling Ecology and Society
Angeler, David G; Swedish University of Agricultural Sciences, Department of Aquatic Sciences and Assessment; david.angeler@slu.se; Drakare, Stina; Swedish University of Agricultural Sciences, Department of Aquatic Sciences and Assessment ; stina.drakare@slu.se; Johnson, Richard K; Swedish University of Agricultural Sciences, Department of Aquatic Sciences and Assessment ; richard.johnson@slu.se.
Revealing the adaptive responses of ecological, social, and economic systems to a transforming biosphere is crucial for understanding system resilience and preventing collapse. However, testing the theory that underpins complex adaptive system organization (e.g., panarchy theory) is challenging. We used multivariate time series modeling to identify scale-specific system organization and, by extension, apparent resilience mechanisms. We used a 20-year time series of invertebrates and phytoplankton from 26 Swedish lakes to test the proposition that a few key-structuring environmental variables at specific scales create discontinuities in community dynamics. Cross-scale structure was manifested in two independent species groups within both communities across...
Tipo: Peer-Reviewed Reports Palavras-chave: Complex adaptive systems dynamics; Complex adaptive systems organization; Cross-scale structure; Discontinuities; Environmental variables; Invertebrates; Lakes; Panarchy; Phytoplankton; Resilience; Time series modeling.
Ano: 2011
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Pigmented Euglenophytes in a natural and shallow lake in the semiarid region of Paraíba State, Brazil Rev. Bras. Bot.
Araujo,Gabrielle Joanne Medeiros; Barbosa,José Etham de Lucena; Barbosa,Luciana Gomes.
A floristic survey of the class Euglenophyceae in Panati Lake (7º11'14" S and 36º49'52" W) is presented. The samples were collected between November 2005 and April 2007 along the margins of the lake, and a total of 29 taxa were collected, described, and illustrated, comprising 11 specifics and 18 infraspecifics, with five typical and 13 non-typical varieties. The genus Trachelomonas showed the greatest richness (13 taxa), followed by the genus Lepocinclis (seven taxa). All of the 29 taxa cataloged had been previously reported for Brazil, most with wide geographical distributions, but all were new records for Paraíba State, and 25 new for northeastern Brazil - reflecting the need for more taxonomic studies of the Euglenophyceae in these locations.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Euglenophyceae; Flora; Phytoplankton.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042012000100004
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Seasonal variability in microplanktonic biomasses in the Gironde dilution plume (Bay of Biscay): relative importance of bacteria ArchiMer
Artigas, Lf.
Bacterial and phytoplankton biomasses were estimated in a four-year study along a saline gradient (the dilution plume of the Gironde estuary on the Aquitanian continental shelf), by measuring bacterial abundance and mean cell volumes (epifluorescence counts) and chlorophyll-a concentrations tin vitro fluorescence). The spatial and temporal distribution of phytoplankton enabled us to determine the seasonal succession of algal blooms, sprouting in the marine waters of the inner shelf in early spring (picoplanktonic forms), reaching their annual maximum (10 mu g L-1) in plume waters in advanced spring, and moving to estuarine waters in the summer (> 20 mu m forms). Bacterial biomasses followed mainly a decreasing dilution gradient, especially in winter and...
Tipo: Text Palavras-chave: Bactéries; Phytoplancton; Rapport des biomasses microbiennes; Variabilité saisonnière; Panache de dilution girondin; Bacterioplankton; Phytoplankton; Microbial biomass ratio; Seasonal variability; Gironde dilution plume.
Ano: 1998 URL: http://archimer.ifremer.fr/doc/00325/43659/43210.pdf
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Effects on phytoplankton growth of dissolved substances produced by fish farming ArchiMer
Arzul, Genevieve; Clement, Alejandro; Pinier, Anne.
Fish Farming enriches the water column in dissolved organic and inorganic material. These materials excreed by the fish, elutriate from uneaten food and derive from other polluting substances. Ratios of the organic/inorganic forms of substances (for example N and P) are thus modified. Such perturbations in turn affect phytoplankton development. From in vitro analyses and tests of water taken from a turbot rearing tank, we show the changes in seawater chemical composition produced as well as the way growth was modified in three phytoplankton species: the diatom, Chaetoceros gracile, and the dinoflagellates, Gymnodinium cf. nagasakiense and Alexandrium minutum. Elutriates from the granules used for feed (0.1 to 100 mg.l(-1)) were found to be stimulating,...
Tipo: Text Palavras-chave: Antibiotique; Fécès; Aliment; Aquaculture; Régulation de croissance; Phytoplancton; Urée; Antibiotic; Faeces; Feed; Fish farming; Growth regulation; Phytoplankton; Urea.
Ano: 1996 URL: http://archimer.ifremer.fr/doc/00188/29887/28340.pdf
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Phytoplankton growth formulation in marine ecosystem models: Should we take into account photo-acclimation and variable stoichiometry in oligotrophic areas? ArchiMer
Ayata, S. -d.; Levy, Marina; Aumont, Olivier; Sciandra, Antoine; Sainte-marie, J.; Tagliabue, A.; Bernard, Olivier.
The aim of this study is to evaluate the consequences of accounting for variable Chl:C (chlorophyll:carbon) and C:N (carbon:nitrogen) ratios in the formulation of phytoplankton growth in biogeochemical models. We compare the qualitative behavior of a suite of phytoplankton growth formulations with increasing complexity: 1) a Redfield formulation (constant C:N ratio) without photo-acclimation (constant Chl:C ratio), 2) a Redfield formulation with diagnostic chlorophyll (variable and empirical Chl:C ratio), 3) a quota formulation (variable C:N ratio) with diagnostic chlorophyll, and 4) a quota formulation with prognostic chlorophyll (dynamic variable). These phytoplankton growth formulations are embedded in a simple marine ecosystem model in a 1D framework...
Tipo: Text Palavras-chave: Biogeochemical modeling; Phytoplankton; Photo-acclimation; Redfield ratio; Internal quota; BATS; Optimization; Micro-genetic algorithm.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00159/27071/25460.pdf
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